Stralign is a Structure alignment program for 3D protein structures by Tatsuya Akutsu. with supervision of the Genome Database Working Groups of the Genome Informatics Research Project, under support of the Human Genome Center, Tokyo, Japan.
Stralign is being made available at no fee if you agree with the license agreement.


  • Although there is no fee, Stralign is NOT in the public domain. You are authorized to obtain and use it only after sending a license agreement . Before you ftp Stralign files you MUST fill out and send the license agreement . Otherwise, you are not permitted to make copies of Stralign .

  • Stralign Anonymous FTP Site
  • Questions &Contact To
  • About the technical issue, contact to:

    And for general information of Stralign :

    N.B. Please do not contact to the Human Genome Center for technical information. Human Genome Center only accepts the License Agreement Form.